A computational framework for predicting drug Mode-of-Action

Chifeng Ma, Yufei Huang, Hung I. Chen, Yidong Chen

    Producción científica: Conference contribution

    Resumen

    The problem of large scale computational drug screening is considered in this paper. A computational framework is developed for microarray profile of drug treatment from the Connectivity Map (cMap) project. The framework is proposed to address the deficiency of cMap prediction. This scheme includes construction of drug Mode-of-Actions (MoA) and subsequently Mode-of-Action (MoA) network, or MoANet and a MoA prediction algorithm based on MoAs. The scheme is tested on the cMap data and an independent data set. The result shows significant improvement over cMap.

    Idioma originalEnglish (US)
    Título de la publicación alojada2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2010
    Páginas374-379
    Número de páginas6
    DOI
    EstadoPublished - 2010
    Evento2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2010 - HongKong, China
    Duración: dic 18 2010dic 21 2010

    Serie de la publicación

    Nombre2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2010

    Other

    Other2010 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2010
    País/TerritorioChina
    CiudadHongKong
    Período12/18/1012/21/10

    ASJC Scopus subject areas

    • Biomedical Engineering
    • Health Informatics

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