tmRDB (tmRNA database)

Christian W Zwieb, Jacek Wower

Research output: Contribution to journalArticle

15 Citations (Scopus)

Abstract

The tmRNA database (tmRDB) is maintained at the University of Texas Health Science Center at Tyler, Texas, and is accessible on the WWW at URL http://psyche.uthct.edu/dbs/tmRDB/tmRDB.html. A tmRDB mirror site is located on the campus of Auburn University, Auburn, Alabama, reachable at the URL http://www.ag.auburn.edu/mirror/tmRDB/. Since April 1997, the tmRDB has provided sequences of tmRNA (previously called 10Sa RNA), a molecule present in most bacteria and some organelles. This release adds 17 new sequences for a total of 60 tmRNAs. Sequences and corresponding tmRNA-encoded tag peptides are tabulated in alphabetical and phylogenetic order. The updated tmRNA alignment improves the secondary structures of known tmRNAs on the level of individual basepairs. tmRDB also provides an introduction to tmRNA function in trans-translation (with links to relevant literature), a limited number of tmRNA secondary structure diagrams, and numerous three-dimensional models generated interactively with the program ERNA-3D.

Original languageEnglish (US)
Pages (from-to)169-170
Number of pages2
JournalNucleic Acids Research
Volume28
Issue number1
StatePublished - Jan 1 2000
Externally publishedYes

Fingerprint

Databases
tmRNA
Organelles
Bacteria
Peptides
Health

ASJC Scopus subject areas

  • Genetics

Cite this

Zwieb, C. W., & Wower, J. (2000). tmRDB (tmRNA database). Nucleic Acids Research, 28(1), 169-170.

tmRDB (tmRNA database). / Zwieb, Christian W; Wower, Jacek.

In: Nucleic Acids Research, Vol. 28, No. 1, 01.01.2000, p. 169-170.

Research output: Contribution to journalArticle

Zwieb, CW & Wower, J 2000, 'tmRDB (tmRNA database)', Nucleic Acids Research, vol. 28, no. 1, pp. 169-170.
Zwieb CW, Wower J. tmRDB (tmRNA database). Nucleic Acids Research. 2000 Jan 1;28(1):169-170.
Zwieb, Christian W ; Wower, Jacek. / tmRDB (tmRNA database). In: Nucleic Acids Research. 2000 ; Vol. 28, No. 1. pp. 169-170.
@article{c2a8906c638e4e39b110c074754059a4,
title = "tmRDB (tmRNA database)",
abstract = "The tmRNA database (tmRDB) is maintained at the University of Texas Health Science Center at Tyler, Texas, and is accessible on the WWW at URL http://psyche.uthct.edu/dbs/tmRDB/tmRDB.html. A tmRDB mirror site is located on the campus of Auburn University, Auburn, Alabama, reachable at the URL http://www.ag.auburn.edu/mirror/tmRDB/. Since April 1997, the tmRDB has provided sequences of tmRNA (previously called 10Sa RNA), a molecule present in most bacteria and some organelles. This release adds 17 new sequences for a total of 60 tmRNAs. Sequences and corresponding tmRNA-encoded tag peptides are tabulated in alphabetical and phylogenetic order. The updated tmRNA alignment improves the secondary structures of known tmRNAs on the level of individual basepairs. tmRDB also provides an introduction to tmRNA function in trans-translation (with links to relevant literature), a limited number of tmRNA secondary structure diagrams, and numerous three-dimensional models generated interactively with the program ERNA-3D.",
author = "Zwieb, {Christian W} and Jacek Wower",
year = "2000",
month = "1",
day = "1",
language = "English (US)",
volume = "28",
pages = "169--170",
journal = "Nucleic Acids Research",
issn = "0305-1048",
publisher = "Oxford University Press",
number = "1",

}

TY - JOUR

T1 - tmRDB (tmRNA database)

AU - Zwieb, Christian W

AU - Wower, Jacek

PY - 2000/1/1

Y1 - 2000/1/1

N2 - The tmRNA database (tmRDB) is maintained at the University of Texas Health Science Center at Tyler, Texas, and is accessible on the WWW at URL http://psyche.uthct.edu/dbs/tmRDB/tmRDB.html. A tmRDB mirror site is located on the campus of Auburn University, Auburn, Alabama, reachable at the URL http://www.ag.auburn.edu/mirror/tmRDB/. Since April 1997, the tmRDB has provided sequences of tmRNA (previously called 10Sa RNA), a molecule present in most bacteria and some organelles. This release adds 17 new sequences for a total of 60 tmRNAs. Sequences and corresponding tmRNA-encoded tag peptides are tabulated in alphabetical and phylogenetic order. The updated tmRNA alignment improves the secondary structures of known tmRNAs on the level of individual basepairs. tmRDB also provides an introduction to tmRNA function in trans-translation (with links to relevant literature), a limited number of tmRNA secondary structure diagrams, and numerous three-dimensional models generated interactively with the program ERNA-3D.

AB - The tmRNA database (tmRDB) is maintained at the University of Texas Health Science Center at Tyler, Texas, and is accessible on the WWW at URL http://psyche.uthct.edu/dbs/tmRDB/tmRDB.html. A tmRDB mirror site is located on the campus of Auburn University, Auburn, Alabama, reachable at the URL http://www.ag.auburn.edu/mirror/tmRDB/. Since April 1997, the tmRDB has provided sequences of tmRNA (previously called 10Sa RNA), a molecule present in most bacteria and some organelles. This release adds 17 new sequences for a total of 60 tmRNAs. Sequences and corresponding tmRNA-encoded tag peptides are tabulated in alphabetical and phylogenetic order. The updated tmRNA alignment improves the secondary structures of known tmRNAs on the level of individual basepairs. tmRDB also provides an introduction to tmRNA function in trans-translation (with links to relevant literature), a limited number of tmRNA secondary structure diagrams, and numerous three-dimensional models generated interactively with the program ERNA-3D.

UR - http://www.scopus.com/inward/record.url?scp=0033983838&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=0033983838&partnerID=8YFLogxK

M3 - Article

C2 - 10592214

AN - SCOPUS:0033983838

VL - 28

SP - 169

EP - 170

JO - Nucleic Acids Research

JF - Nucleic Acids Research

SN - 0305-1048

IS - 1

ER -