TY - JOUR
T1 - The Signal Recognition Particle Database (SRPDB)
AU - Larsen, Niels
AU - Samuelsson, Tore
AU - Zwieb, Christian
N1 - Funding Information:
N.L. was supported by the Center for Microbial Ecology at Michigan State University (DEB #9120006), T.S. by grant B-BU 9676-311 from the Swedish Natural Science Research Council, and C.Z. by NIH grant GM-49034. We also thank the Free Software Foundation and Larry Wall for their excellent software.
PY - 1998/1/1
Y1 - 1998/1/1
N2 - This release of the SRPDB (signal recognition particle database, http://pegasus.uthct.edu/SRPDB/SRPDB.html) adds four SRP RNA sequences (a total of 99 SRP RNA sequences), 23 SRP protein sequences (a total of 63 protein sequences from SRP9, SRP14, SRP19, SRP21, SRP54, SRP68 or SRP72), and, for the first time, sequences of the alpha subunit of the eukaryotic SRP receptor and its homologous bacterial proteins (a total of 21 sequences). Sequences are offered phylogenetically ordered, annotated with links to the primary databases, and in aligned form. Also downloadable are sample SRP RNA secondary structure diagrams, three-dimensional models of representative SRP RNAs, and search motifs.
AB - This release of the SRPDB (signal recognition particle database, http://pegasus.uthct.edu/SRPDB/SRPDB.html) adds four SRP RNA sequences (a total of 99 SRP RNA sequences), 23 SRP protein sequences (a total of 63 protein sequences from SRP9, SRP14, SRP19, SRP21, SRP54, SRP68 or SRP72), and, for the first time, sequences of the alpha subunit of the eukaryotic SRP receptor and its homologous bacterial proteins (a total of 21 sequences). Sequences are offered phylogenetically ordered, annotated with links to the primary databases, and in aligned form. Also downloadable are sample SRP RNA secondary structure diagrams, three-dimensional models of representative SRP RNAs, and search motifs.
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U2 - 10.1093/nar/26.1.177
DO - 10.1093/nar/26.1.177
M3 - Article
C2 - 9399828
AN - SCOPUS:0031866668
VL - 26
SP - 177
EP - 178
JO - Nucleic Acids Research
JF - Nucleic Acids Research
SN - 0305-1048
IS - 1
ER -