The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis

Kyung J. Kwon-Chung, John E. Bennett, Brian L Wickes, Wieland Meyer, Christina A. Cuomo, Kurt R. Wollenburg, Tihana A. Bicanic, Elizabeth Castañeda, Yun C. Chang, Jianghan Chen, Massimo Cogliati, Françoise Dromer, David Ellis, Scott G. Filler, Matthew C. Fisher, Thomas S. Harrison, Steven M. Holland, Shigeru Kohno, James W. Kronstad, Marcia Lazera & 13 others Stuart M. Levitz, Michail S. Lionakis, Robin C. May, Popchai Ngamskulrongroj, Peter G. Pappas, John R. Perfect, Volker Rickerts, Tania C. Sorrell, Thomas J. Walsh, Peter R. Williamson, Jianping Xu, Adrian M. Zelazny, Arturo Casadevall

Research output: Contribution to journalArticle

79 Citations (Scopus)

Abstract

Cryptococcosis is a potentially lethal disease of humans/animals caused by Cryptococcus neoformans and Cryptococcus gattii. Distinction between the two species is based on phenotypic and genotypic characteristics. Recently, it was proposed that C. neoformans be divided into two species and C. gattii into five species based on a phylogenetic analysis of 115 isolates. While this proposal adds to the knowledge about the genetic diversity and population structure of cryptococcosis agents, the published genotypes of 2,606 strains have already revealed more genetic diversity than is encompassed by seven species. Naming every clade as a separate species at this juncture will lead to continuing nomenclatural instability. In the absence of biological differences between clades and no consensus about how DNA sequence alone can delineate a species, we recommend using "Cryptococcus neoformans species complex" and "C. gattii species complex" as a practical intermediate step, rather than creating more species. This strategy recognizes genetic diversity without creating confusion.

Original languageEnglish (US)
Article numbere00357-16
JournalmSphere
Volume2
Issue number1
DOIs
StatePublished - Jan 1 2017

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Cryptococcus gattii
Cryptococcosis
Cryptococcus neoformans
Terminology
Animal Diseases
Genotype
Population

Keywords

  • Clade
  • Cryptococcosis
  • Cryptococcus gattii
  • Cryptococcus neoformans
  • Genetic diversity
  • New nomenclature
  • Species complex

ASJC Scopus subject areas

  • Microbiology
  • Molecular Biology

Cite this

Kwon-Chung, K. J., Bennett, J. E., Wickes, B. L., Meyer, W., Cuomo, C. A., Wollenburg, K. R., ... Casadevall, A. (2017). The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis. mSphere, 2(1), [e00357-16]. https://doi.org/10.1128/mSphere.00357-16

The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis. / Kwon-Chung, Kyung J.; Bennett, John E.; Wickes, Brian L; Meyer, Wieland; Cuomo, Christina A.; Wollenburg, Kurt R.; Bicanic, Tihana A.; Castañeda, Elizabeth; Chang, Yun C.; Chen, Jianghan; Cogliati, Massimo; Dromer, Françoise; Ellis, David; Filler, Scott G.; Fisher, Matthew C.; Harrison, Thomas S.; Holland, Steven M.; Kohno, Shigeru; Kronstad, James W.; Lazera, Marcia; Levitz, Stuart M.; Lionakis, Michail S.; May, Robin C.; Ngamskulrongroj, Popchai; Pappas, Peter G.; Perfect, John R.; Rickerts, Volker; Sorrell, Tania C.; Walsh, Thomas J.; Williamson, Peter R.; Xu, Jianping; Zelazny, Adrian M.; Casadevall, Arturo.

In: mSphere, Vol. 2, No. 1, e00357-16, 01.01.2017.

Research output: Contribution to journalArticle

Kwon-Chung, KJ, Bennett, JE, Wickes, BL, Meyer, W, Cuomo, CA, Wollenburg, KR, Bicanic, TA, Castañeda, E, Chang, YC, Chen, J, Cogliati, M, Dromer, F, Ellis, D, Filler, SG, Fisher, MC, Harrison, TS, Holland, SM, Kohno, S, Kronstad, JW, Lazera, M, Levitz, SM, Lionakis, MS, May, RC, Ngamskulrongroj, P, Pappas, PG, Perfect, JR, Rickerts, V, Sorrell, TC, Walsh, TJ, Williamson, PR, Xu, J, Zelazny, AM & Casadevall, A 2017, 'The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis', mSphere, vol. 2, no. 1, e00357-16. https://doi.org/10.1128/mSphere.00357-16
Kwon-Chung, Kyung J. ; Bennett, John E. ; Wickes, Brian L ; Meyer, Wieland ; Cuomo, Christina A. ; Wollenburg, Kurt R. ; Bicanic, Tihana A. ; Castañeda, Elizabeth ; Chang, Yun C. ; Chen, Jianghan ; Cogliati, Massimo ; Dromer, Françoise ; Ellis, David ; Filler, Scott G. ; Fisher, Matthew C. ; Harrison, Thomas S. ; Holland, Steven M. ; Kohno, Shigeru ; Kronstad, James W. ; Lazera, Marcia ; Levitz, Stuart M. ; Lionakis, Michail S. ; May, Robin C. ; Ngamskulrongroj, Popchai ; Pappas, Peter G. ; Perfect, John R. ; Rickerts, Volker ; Sorrell, Tania C. ; Walsh, Thomas J. ; Williamson, Peter R. ; Xu, Jianping ; Zelazny, Adrian M. ; Casadevall, Arturo. / The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis. In: mSphere. 2017 ; Vol. 2, No. 1.
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