Impact of family structure and common environment on heritability estimation for neuroimaging genetics studies using Sequential Oligogenic Linkage Analysis Routines

Mary Ellen Koran, Tricia A. Thornton-Wells, Neda Jahanshad, David C. Glahn, Paul M. Thompson, John Blangero, Thomas E. Nichols, Peter Kochunov, Bennett A. Landman

Research output: Contribution to journalArticle

10 Citations (Scopus)

Abstract

Imaging genetics is an emerging methodological field that combines genetic information with medical imaging-derived metrics to understand how genetic factors impact observable phenotypes. In order for a trait to be a reasonable phenotype in an imaging genetics study, it must be heritable: at least some proportion of its variance must be due to genetic influences. The Sequential Oligogenic Linkage Analysis Routines (SOLAR) imaging genetics software can estimate the heritability of a trait in complex pedigrees. We investigate the ability of SOLAR to accurately estimate heritability and common environmental effects on simulated imaging phenotypes in various family structures. We found that heritability is reliably estimated with small family-based studies of 40 to 80 individuals, though subtle differences remain between the family structures. In an imaging application analysis, we found that with 80 subjects in any of the family structures, estimated heritability of white matter fractional anisotropy was biased by <10% for every region of interest. Results from these studies can be used when investigators are evaluating power in planning genetic analyzes.

Original languageEnglish (US)
Article number014005
JournalJournal of Medical Imaging
Volume1
Issue number1
DOIs
StatePublished - Apr 1 2014
Externally publishedYes

Fingerprint

Neuroimaging
Phenotype
Imaging techniques
Aptitude
Anisotropy
Diagnostic Imaging
Pedigree
Individuality
Software
Research Personnel
Medical imaging
Environmental impact
Genetics
Planning

Keywords

  • heritability
  • imaging genetics
  • power calculation
  • statistical analysis

ASJC Scopus subject areas

  • Bioengineering
  • Radiology Nuclear Medicine and imaging

Cite this

Impact of family structure and common environment on heritability estimation for neuroimaging genetics studies using Sequential Oligogenic Linkage Analysis Routines. / Koran, Mary Ellen; Thornton-Wells, Tricia A.; Jahanshad, Neda; Glahn, David C.; Thompson, Paul M.; Blangero, John; Nichols, Thomas E.; Kochunov, Peter; Landman, Bennett A.

In: Journal of Medical Imaging, Vol. 1, No. 1, 014005, 01.04.2014.

Research output: Contribution to journalArticle

Koran, ME, Thornton-Wells, TA, Jahanshad, N, Glahn, DC, Thompson, PM, Blangero, J, Nichols, TE, Kochunov, P & Landman, BA 2014, 'Impact of family structure and common environment on heritability estimation for neuroimaging genetics studies using Sequential Oligogenic Linkage Analysis Routines', Journal of Medical Imaging, vol. 1, no. 1, 014005. https://doi.org/10.1117/1.JMI.1.1.014005
Koran, Mary Ellen ; Thornton-Wells, Tricia A. ; Jahanshad, Neda ; Glahn, David C. ; Thompson, Paul M. ; Blangero, John ; Nichols, Thomas E. ; Kochunov, Peter ; Landman, Bennett A. / Impact of family structure and common environment on heritability estimation for neuroimaging genetics studies using Sequential Oligogenic Linkage Analysis Routines. In: Journal of Medical Imaging. 2014 ; Vol. 1, No. 1.
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