Genome-wide scan for estimated glomerular filtration rate in multi-ethnic diabetic populations: The Family Investigation of Nephropathy and Diabetes (FIND)

Jeffrey R. Schelling, Hanna E. Abboud, Susanne B. Nicholas, Madeleine V. Pahl, John R. Sedor, Sharon G. Adler, Nedal H. Arar, Donald W. Bowden, Robert C. Elston, Barry I. Freedman, Katrina A.B. Goddard, Xiuqing Guo, Robert L. Hanson, Eli Ipp, Sudha K. Iyengar, Gyungah Jun, W. H.Linda Kao, Balakuntalam S. Kasinath, Paul L. Kimmel, Michael J. KlagWilliam C. Knowler, Robert G. Nelson, Rulan S. Parekh, Shannon R. Quade, Stephen S. Rich, Mohammed F. Saad, Marina Scavini, Michael W. Smith, Kent Taylor, Cheryl A. Winkler, Philip G. Zager, Vallabh O. Shah

Research output: Contribution to journalArticlepeer-review

77 Scopus citations

Abstract

OBJECTIVE - Diabetic nephropathy, the most common cause of end-stage renal disease, aggregates in families and specific ethnic groups. Deconstructing diabetic nephropathy into intermediate, quantitative phenotypes may increase feasibility of detecting susceptibility loci by genetic screens. Glomerular filtration rate (GFR), which characterizes diabetic nephropathy, was employed as a quantitative trait in a preliminary whole-genome scan. RESEARCH DESIGN AND METHODS - Estimated GFR (eGFR) was calculated for 882 diabetic sibpairs (mean age 57 years) of African-American (25.6% of total), American Indian (8.6%), European-American (14.2%), and Mexican-American (51.6%) descent enrolled in the initial phase of the Family Investigation of Nephropathy and Diabetes (FIND). A whole-genome scan was performed using 404 microsatellite markers (average spacing 9 cM) and model-free linkage analysis. RESULTS - For all ethnicities combined, strong evidence for linkage was observed on chromosomes 1q43 (P = 3.6 × 10-3), 7q36.1 (P = 2.1 × 10-4), 8q13.3 (P = 4.6 × 10-4), and 18q23.3 (P = 2.7 × 10-3). Mexican-American families, who comprised the major ethnic subpopulation in FIND, contributed to linkage on chromosomes 1q43, 2p13.3, 7q36.1, 8q13.3, and 18q23.3, whereas African-American and American-Indian families displayed linkage peaks on chromosomes 11p15.1 and 15q22.3, respectively. CONCLUSIONS - We have demonstrated multiple chromosomal regions linked to eGFR in a multi-ethnic collection of families ascertained by a proband with diabetic nephropathy. Identification of genetic variants within these loci that are responsible for the linkage signals could lead to predictive tests or novel therapies for subsets of patients at risk for diabetic nephropathy.

Original languageEnglish (US)
Pages (from-to)235-243
Number of pages9
JournalDiabetes
Volume57
Issue number1
DOIs
StatePublished - Jan 2008

ASJC Scopus subject areas

  • Internal Medicine
  • Endocrinology, Diabetes and Metabolism

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