Genetic Analysis Workshop 18: Methods and strategies for analyzing human sequence and phenotype data in members of extended pedigrees

Heike Bickeböller; Julia N. Bailey; Joseph Beyene; Rita M. Cantor; Heather J. Cordell; Robert C. Culverhouse; Corinne D. Engelman; David W. Fardo; Saurabh Ghosh; Inke R. König; Justo Lorenzo Bermejo; Phillip E. Melton; Stephanie A. Santorico; Glen A. Satten; Lei Sun; Nathan L. Tintle; Andreas Ziegler; Jean W. MacCluer; Laura Almasy

doi:10.1186/1753-6561-8-S1-S1

Genetic Analysis Workshop 18: Methods and strategies for analyzing human sequence and phenotype data in members of extended pedigrees

Heike Bickeböller, Julia N. Bailey, Joseph Beyene, Rita M. Cantor, Heather J. Cordell, Robert C. Culverhouse, Corinne D. Engelman, David W. Fardo, Saurabh Ghosh, Inke R. König, Justo Lorenzo Bermejo, Phillip E. Melton, Stephanie A. Santorico, Glen A. Satten, Lei Sun, Nathan L. Tintle, Andreas Ziegler, Jean W. MacCluer, Laura Almasy

Research output: Contribution to journal › Article

12 Scopus citations

Abstract

Genetic Analysis Workshop 18 provided a platform for developing and evaluating statistical methods to analyze whole-genome sequence data from a pedigree-based sample. In this article we present an overview of the data sets and the contributions that analyzed these data. The family data, donated by the Type 2 Diabetes Genetic Exploration by Next-Generation Sequencing in Ethnic Samples Consortium, included sequence-level genotypes based on sequencing and imputation, genome-wide association genotypes from prior genotyping arrays, and phenotypes from longitudinal assessments. The contributions from individual research groups were extensively discussed before, during, and after the workshop in theme-based discussion groups before being submitted for publication.

Original language	English (US)
Article number	S1
Journal	BMC Proceedings
Volume	8
DOIs	https://doi.org/10.1186/1753-6561-8-S1-S1
State	Published - Jun 17 2014

ASJC Scopus subject areas

Biochemistry, Genetics and Molecular Biology(all)

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Bickeböller, H., Bailey, J. N., Beyene, J., Cantor, R. M., Cordell, H. J., Culverhouse, R. C., Engelman, C. D., Fardo, D. W., Ghosh, S., König, I. R., Lorenzo Bermejo, J., Melton, P. E., Santorico, S. A., Satten, G. A., Sun, L., Tintle, N. L., Ziegler, A., MacCluer, J. W., & Almasy, L. (2014). Genetic Analysis Workshop 18: Methods and strategies for analyzing human sequence and phenotype data in members of extended pedigrees. BMC Proceedings, 8, [S1]. https://doi.org/10.1186/1753-6561-8-S1-S1

Genetic Analysis Workshop 18 : Methods and strategies for analyzing human sequence and phenotype data in members of extended pedigrees. / Bickeböller, Heike; Bailey, Julia N.; Beyene, Joseph; Cantor, Rita M.; Cordell, Heather J.; Culverhouse, Robert C.; Engelman, Corinne D.; Fardo, David W.; Ghosh, Saurabh; König, Inke R.; Lorenzo Bermejo, Justo; Melton, Phillip E.; Santorico, Stephanie A.; Satten, Glen A.; Sun, Lei; Tintle, Nathan L.; Ziegler, Andreas; MacCluer, Jean W.; Almasy, Laura.

In: BMC Proceedings, Vol. 8, S1, 17.06.2014.

Research output: Contribution to journal › Article

Bickeböller, H, Bailey, JN, Beyene, J, Cantor, RM, Cordell, HJ, Culverhouse, RC, Engelman, CD, Fardo, DW, Ghosh, S, König, IR, Lorenzo Bermejo, J, Melton, PE, Santorico, SA, Satten, GA, Sun, L, Tintle, NL, Ziegler, A, MacCluer, JW & Almasy, L 2014, 'Genetic Analysis Workshop 18: Methods and strategies for analyzing human sequence and phenotype data in members of extended pedigrees', BMC Proceedings, vol. 8, S1. https://doi.org/10.1186/1753-6561-8-S1-S1

Bickeböller, Heike ; Bailey, Julia N. ; Beyene, Joseph ; Cantor, Rita M. ; Cordell, Heather J. ; Culverhouse, Robert C. ; Engelman, Corinne D. ; Fardo, David W. ; Ghosh, Saurabh ; König, Inke R. ; Lorenzo Bermejo, Justo ; Melton, Phillip E. ; Santorico, Stephanie A. ; Satten, Glen A. ; Sun, Lei ; Tintle, Nathan L. ; Ziegler, Andreas ; MacCluer, Jean W. ; Almasy, Laura. / Genetic Analysis Workshop 18 : Methods and strategies for analyzing human sequence and phenotype data in members of extended pedigrees. In: BMC Proceedings. 2014 ; Vol. 8.

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abstract = "Genetic Analysis Workshop 18 provided a platform for developing and evaluating statistical methods to analyze whole-genome sequence data from a pedigree-based sample. In this article we present an overview of the data sets and the contributions that analyzed these data. The family data, donated by the Type 2 Diabetes Genetic Exploration by Next-Generation Sequencing in Ethnic Samples Consortium, included sequence-level genotypes based on sequencing and imputation, genome-wide association genotypes from prior genotyping arrays, and phenotypes from longitudinal assessments. The contributions from individual research groups were extensively discussed before, during, and after the workshop in theme-based discussion groups before being submitted for publication.",

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AU - Cordell, Heather J.

AU - Culverhouse, Robert C.

AU - Engelman, Corinne D.

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AU - Ghosh, Saurabh

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AU - Lorenzo Bermejo, Justo

AU - Melton, Phillip E.

AU - Santorico, Stephanie A.

AU - Satten, Glen A.

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