TY - JOUR
T1 - A conceptual framework for nomenclatural stability and validity of medically important fungi
T2 - a proposed global consensus guideline for fungal name changes supported by ABP, ASM, CLSI, ECMM, ESCMID-EFISG, EUCAST-AFST, FDLC, IDSA, ISHAM, MMSA, and MSGERC
AU - Walsh, Thomas J.
AU - de Hoog, Sybren
AU - Ahmed, Sarah A.
AU - Alastruey-Izquierdo, Ana
AU - Alexander, Barbara D.
AU - Arendrup, Maiken Cavling
AU - Babady, Esther
AU - Bai, Feng Yan
AU - Balada-Llasat, Joan Miquel
AU - Borman, Andrew
AU - Chowdhary, Anuradha
AU - Clark, Andrew
AU - Colgrove, Robert C.
AU - Cornely, Oliver A.
AU - Dingle, Tanis C.
AU - Dufresne, Philippe J.
AU - Fuller, Jeff
AU - Gangneux, Jean Pierre
AU - Gibas, Connie
AU - Glasgow, Heather
AU - Gräser, Yvonne
AU - Guillot, Jacques
AU - Groll, Andreas H.
AU - Haase, Gerhard
AU - Hanson, Kimberly
AU - Harrington, Amanda
AU - Hawksworth, David L.
AU - Hayden, Randall T.
AU - Hoenigl, Martin
AU - Hubka, Vit
AU - Johnson, Kristie
AU - Kus, Julianne V.
AU - Li, Ruoyu
AU - Meis, Jacques F.
AU - Lackner, Michaela
AU - Lanternier, Fanny
AU - Leal, Sixto M.
AU - Lee, Francesca
AU - Lockhart, Shawn R.
AU - Luethy, Paul
AU - Martin, Isabella
AU - Kwon-Chung, Kyung J.
AU - Meyer, Wieland
AU - Nguyen, M. Hong
AU - Ostrosky-Zeichner, Luis
AU - Palavecino, Elizabeth
AU - Pancholi, Preeti
AU - Pappas, Peter G.
AU - Procop, Gary W.
AU - Redhead, Scott A.
AU - Rhoads, Daniel D.
AU - Riedel, Stefan
AU - Stevens, Bryan
AU - Sullivan, Kaede Ota
AU - Vergidis, Paschalis
AU - Roilides, Emmanuel
AU - Seyedmousavi, Amir
AU - Tao, Lili
AU - Vicente, Vania A.
AU - Vitale, Roxana G.
AU - Wang, Qi Ming
AU - Wengenack, Nancy L.
AU - Westblade, Lars
AU - Wiederhold, Nathan
AU - White, Lewis
AU - Wojewoda, Christina M.
AU - Zhang, Sean X.
N1 - Publisher Copyright:
© 2023 de Hoog et al. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.
PY - 2023
Y1 - 2023
N2 - The rapid pace of name changes of medically important fungi is creating challenges for clinical laboratories and clinicians involved in patient care. We describe two sources of name change which have different drivers, at the species versus the genus level. Some suggestions are made here to reduce the number of name changes. We urge taxonomists to provide diagnostic markers of taxonomic novelties. Given the instability of phylogenetic trees due to variable taxon sampling, we advocate to maintain genera at the largest possible size. Reporting of identified species in complexes or series should where possible comprise both the name of the overarching species and that of the molecular sibling, often cryptic species. Because the use of different names for the same species will be unavoidable for many years to come, an open access online database of the names of all medically important fungi, with proper nomenclatural designation and synonymy, is essential. We further recommend that while taxonomic discovery continues, the adaptation of new name changes by clinical laboratories and clinicians be reviewed routinely by a standing committee for validation and stability over time, with reference to an open access database, wherein reasons for changes are listed in a transparent way.
AB - The rapid pace of name changes of medically important fungi is creating challenges for clinical laboratories and clinicians involved in patient care. We describe two sources of name change which have different drivers, at the species versus the genus level. Some suggestions are made here to reduce the number of name changes. We urge taxonomists to provide diagnostic markers of taxonomic novelties. Given the instability of phylogenetic trees due to variable taxon sampling, we advocate to maintain genera at the largest possible size. Reporting of identified species in complexes or series should where possible comprise both the name of the overarching species and that of the molecular sibling, often cryptic species. Because the use of different names for the same species will be unavoidable for many years to come, an open access online database of the names of all medically important fungi, with proper nomenclatural designation and synonymy, is essential. We further recommend that while taxonomic discovery continues, the adaptation of new name changes by clinical laboratories and clinicians be reviewed routinely by a standing committee for validation and stability over time, with reference to an open access database, wherein reasons for changes are listed in a transparent way.
KW - fungi
KW - nomenclature
KW - taxonomy
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U2 - 10.1128/jcm.00873-23
DO - 10.1128/jcm.00873-23
M3 - Review article
C2 - 37882528
AN - SCOPUS:85178500624
SN - 0095-1137
VL - 61
JO - Journal of clinical microbiology
JF - Journal of clinical microbiology
IS - 11
ER -