TY - JOUR
T1 - A bioinformatics approach towards bronchopulmonary dysplasia
AU - Valadie, Charles Taylor
AU - Arya, Shreyas
AU - Arora, Tanima
AU - Pandillapalli, Nisha Reddy
AU - Moreira, Alvaro
N1 - Publisher Copyright:
© 2023 AME Publishing Company. All rights reserved.
PY - 2023/6
Y1 - 2023/6
N2 - Background and Objective: Bronchopulmonary dysplasia (BPD) is the most common morbidity associated with prematurity and remains a significant clinical challenge. Bioinformatic approaches, such as genomics, transcriptomics, and proteomics, have emerged as novel methods for studying the underlying mechanisms driving BPD pathogenesis. These methods can be used alongside clinical data to develop a better understanding of BPD and potentially identify the most at risk neonates within the first few weeks of neonatal life. The objective of this review is to provide an overview of the current state-of-the-art in bioinformatics for BPD research. Methods: We conducted a literature review of bioinformatics approaches for BPD using PubMed. The following keywords were used: “biomedical informatics”, “bioinformatics”, “bronchopulmonary dysplasia”, and “omics”. Key Content and Findings: This review highlighted the importance of omic-approaches to better understand BPD and potential avenues for future research. We described the use of machine learning (ML) and the need for systems biology methods for integrating large-scale data from multiple tissues. We summarized a handful of studies that utilized bioinformatics for BPD in order to better provide a view of where things currently stand, identify areas of ongoing research, and concluded with challenges that remain in the field. Conclusions: Bioinformatics has the potential to enable a more comprehensive understanding of BPD pathogenesis, facilitating a personalized and precise approach to neonatal care. As we continue to push the boundaries of biomedical research, biomedical informatics (BMI) will undoubtedly play a key role in unraveling new frontiers in disease understanding, prevention, and treatment.
AB - Background and Objective: Bronchopulmonary dysplasia (BPD) is the most common morbidity associated with prematurity and remains a significant clinical challenge. Bioinformatic approaches, such as genomics, transcriptomics, and proteomics, have emerged as novel methods for studying the underlying mechanisms driving BPD pathogenesis. These methods can be used alongside clinical data to develop a better understanding of BPD and potentially identify the most at risk neonates within the first few weeks of neonatal life. The objective of this review is to provide an overview of the current state-of-the-art in bioinformatics for BPD research. Methods: We conducted a literature review of bioinformatics approaches for BPD using PubMed. The following keywords were used: “biomedical informatics”, “bioinformatics”, “bronchopulmonary dysplasia”, and “omics”. Key Content and Findings: This review highlighted the importance of omic-approaches to better understand BPD and potential avenues for future research. We described the use of machine learning (ML) and the need for systems biology methods for integrating large-scale data from multiple tissues. We summarized a handful of studies that utilized bioinformatics for BPD in order to better provide a view of where things currently stand, identify areas of ongoing research, and concluded with challenges that remain in the field. Conclusions: Bioinformatics has the potential to enable a more comprehensive understanding of BPD pathogenesis, facilitating a personalized and precise approach to neonatal care. As we continue to push the boundaries of biomedical research, biomedical informatics (BMI) will undoubtedly play a key role in unraveling new frontiers in disease understanding, prevention, and treatment.
KW - Biomedical informatics (BMI)
KW - bioinformatics
KW - bronchopulmonary dysplasia (BPD)
KW - computational biology
KW - genomics
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U2 - 10.21037/tp-23-133
DO - 10.21037/tp-23-133
M3 - Review article
C2 - 37427053
AN - SCOPUS:85166076168
SN - 2224-4336
VL - 12
SP - 1213
EP - 1224
JO - Translational Pediatrics
JF - Translational Pediatrics
IS - 6
ER -