Find Research Outputs


Beyond consensus: Embracing heterogeneity in curated neuroimaging meta-analysis

Ngo, G. H., Eickhoff, S. B., Nguyen, M., Sevinc, G., Fox, P. T., Spreng, R. N. & Yeo, B. T. T., Oct 15 2019, In : NeuroImage. 200, p. 142-158 17 p.

Research output: Contribution to journalArticle

Mental Disorders
1 Citation (Scopus)

Bifrontal approach for clip ligation of bilateral ethmoidal dural arteriovenous fistulas: Operative video

Cole, T. S., Gandhi, S., Mascitelli, J. R., Hardesty, D., Cavallo, C. & Lawton, M. T., Jan 1 2019, In : Neurosurgical Focus. 46, V14.

Research output: Contribution to journalArticle

Central Nervous System Vascular Malformations
Surgical Instruments

Biological factors involved in alveolar bone regeneration: Consensus report of Working Group 1 of the 15th European Workshop on Periodontology on Bone Regeneration

Giannobile, W. V., Berglundh, T., Al-Nawas, B., Araujo, M., Bartold, P. M., Bouchard, P., Chapple, I., Gruber, R., Lundberg, P., Sculean, A., Lang, N. P., Lyngstadaas, P., Kebschull, M., Galindo-Moreno, P., Schwartz, Z., Shapira, L., Stavropoulos, A. & Reseland, J., Jun 1 2019, In : Journal of Clinical Periodontology. 46, S21, p. 6-11 6 p.

Research output: Contribution to journalArticle

Open Access
Bone Regeneration
Biological Factors
Bone and Bones
Mouth Rehabilitation
6 Citations (Scopus)
Lung Diseases
2 Citations (Scopus)

Bleeding Complications in Lower-Extremity Peripheral Vascular Interventions: Insights From the NCDR PVI Registry

Bhardwaj, B., Spertus, J. A., Kennedy, K. F., Jones, W. S., Safley, D., Tsai, T. T., Aronow, H. D., Vora, A. N., Pokharel, Y., Kumar, A., Attaran, R. R., Feldman, D. N., Armstrong, E., Prasad, A., Gray, B. & Salisbury, A. C., Jun 24 2019, In : JACC: Cardiovascular Interventions. 12, 12, p. 1140-1149 10 p.

Research output: Contribution to journalArticle

Blood Vessels
Lower Extremity

Blockade of MCU-Mediated Ca 2+ Uptake Perturbs Lipid Metabolism via PP4-Dependent AMPK Dephosphorylation

Tomar, D., Jaña, F., Dong, Z., Quinn, W. J., Jadiya, P., Breves, S. L., Daw, C. C., Srikantan, S., Shanmughapriya, S., Nemani, N., Carvalho, E., Tripathi, A., Worth, A. M., Zhang, X., Razmpour, R., Seelam, A., Rhode, S., Mehta, A. V., Murray, M., Slade, D. & 12 others, Ramirez, S. H., Mishra, P., Gerhard, G. S., Caplan, J., Norton, L., Sharma, K., Rajan, S., Balciunas, D., Wijesinghe, D. S., Ahima, R. S., Baur, J. A. & Muniswamy, M., Mar 26 2019, In : Cell Reports. 26, 13, p. 3709-3725.e7

Research output: Contribution to journalArticle

Open Access
AMP-Activated Protein Kinases
Lipid Metabolism
2 Citations (Scopus)

Borderline-resectable pancreatic adenocarcinoma: Contour irregularity of the venous confluence in pre-operative computed tomography predicts histopathological infiltration

Kaissis, G. A., Lohöfer, F. K., Ziegelmayer, S., Danner, J., Jäger, C., Schirren, R., Ankerst, D. P., Ceyhan, G. O., Friess, H., Rummeny, E. J., Weichert, W. & Braren, R. F., Jan 1 2019, In : PLoS One. 14, 1, e0208717.

Research output: Contribution to journalArticle

computed tomography

Brain-based ranking of cognitive domains to predict schizophrenia

Karrer, T. M., Bassett, D. S., Derntl, B., Gruber, O., Aleman, A., Jardri, R., Laird, A. R., Fox, P. T., Eickhoff, S. B., Grisel, O., Varoquaux, G., Thirion, B. & Bzdok, D., Jan 1 2019, In : Human Brain Mapping.

Research output: Contribution to journalArticle

Brain Diseases
1 Citation (Scopus)

BRCA1-associated R-loop affects transcription and differentiation in breast luminal epithelial cells

Chiang, H. C., Zhang, X., Li, J., Zhao, X., Chen, J., Wang, H. T. H., Jatoi, I., Brenner, A., Hu, Y. & Li, R., Jun 4 2019, In : Nucleic acids research. 47, 10, p. 5086-5099 14 p.

Research output: Contribution to journalArticle

Open Access
Epithelial Cells
Stem Cells
Breast Neoplasms

BRCA1 mutations attenuate super-enhancer function and chromatin looping in haploinsufficient human breast epithelial cells

Zhang, X., Wang, Y., Chiang, H. C., Hsieh, Y. P., Lu, C., Park, B. H., Jatoi, I., Jin, V. X., Hu, Y. & Li, R., Apr 17 2019, In : Breast Cancer Research. 21, 1, 51.

Research output: Contribution to journalArticle

Open Access
Epithelial Cells
2 Citations (Scopus)

Broad spectrum activity of the checkpoint kinase 1 inhibitor prexasertib as a single agent or chemopotentiator across a range of preclinical pediatric tumor models

Lowery, C. D., Dowless, M., Renschler, M., Blosser, W., VanWye, A. B., Stephens, J. R., Iversen, P. W., Lin, A. B., Beckmann, R. P., Krytska, K., Cole, K. A., Maris, J. M., Hawkins, D. S., Rubin, B. P., Kurmasheva, R. T., Houghton, P. J., Gorlick, R., Anders Kolb, E., Kang, M. H., Patrick Reynolds, C. & 4 others, Erickson, S. W., Teicher, B. A., Smith, M. A. & Stancato, L. F., Apr 1 2019, In : Clinical Cancer Research. 25, 7, p. 2278-2289 12 p.

Research output: Contribution to journalArticle

Combination Drug Therapy

Burn injury is associated with an infiltration of the wound site with myeloid-derived suppressor cells

Schwacha, M. G., Scroggins, S. R., Montgomery, R. K., Nicholson, S. E. & Cap, A. P., Jan 1 2019, In : Cellular Immunology.

Research output: Contribution to journalArticle

Wounds and Injuries
Myeloid-Derived Suppressor Cells
Anti-Inflammatory Agents

Ca2+ entry via TRPC1 is essential for cellular differentiation and modulates secretion via the SNARE complex

Schaar, A., Sun, Y., Sukumaran, P., Rosenberger, T. A., Krout, D., Roemmich, J. N., Brinbaumer, L., Claycombe-Larson, K. & Singh, B. B., Jul 1 2019, In : Journal of cell science. 132, 13

Research output: Contribution to journalArticle

Open Access
SNARE Proteins
2 Citations (Scopus)

Calorie restriction protects neural stem cells from age-related deficits in the subventricular zone

Apple, D. M., Mahesula, S., Fonseca, R. S., Zhu, C. & Cearley, E. K., Jan 1 2019, In : Aging. 11, 1, p. 115-126 12 p.

Research output: Contribution to journalArticle

Neural Stem Cells
Lateral Ventricles

Cancer Testis Antigen Promotes Triple Negative Breast Cancer Metastasis and is Traceable in the Circulating Extracellular Vesicles

Kannan, A., Philley, J. V., Hertweck, K. L., Ndetan, H., Singh, K. P., Sivakumar, S., Wells, R. B., Vadlamudi, R. K. & Dasgupta, S., Dec 1 2019, In : Scientific reports. 9, 1, 11632.

Research output: Contribution to journalArticle

Open Access
Triple Negative Breast Neoplasms
Testicular Neoplasms
Neoplasm Metastasis

Canine osteosarcoma genome sequencing identifies recurrent mutations in DMD and the histone methyltransferase gene SETD2

Gardner, H. L., Sivaprakasam, K., Briones, N., Zismann, V., Perdigones, N., Drenner, K., Facista, S., Richholt, R., Liang, W., Aldrich, J., Trent, J. M., Shields, P. G., Robinson, N., Johnson, J., Lana, S., Houghton, P. J., Fenger, J., Lorch, G., Janeway, K. A., London, C. A. & 1 others, Hendricks, W. P. D., Dec 1 2019, In : Communications Biology. 2, 1, 266.

Research output: Contribution to journalArticle

Open Access

Cardiac changes in epileptic baboons with high-frequency microburst VNS therapy: A pilot study

de la Garza, M. A., Poldiak, D., Shade, R., Salinas, F. S., Papanastassiou, A. M. & Szabo, C. A., Sep 1 2019, In : Epilepsy Research. 155, 106156.

Research output: Contribution to journalArticle

Vagus Nerve Stimulation
Heart Rate
Sudden Death

Cardiolipin remodeling by ALCAT1 links mitochondrial dysfunction to Parkinson’s diseases

Song, C., Zhang, J., Qi, S., Liu, Z., Zhang, X., Zheng, Y., Andersen, J. P., Zhang, W., Strong, J. R., Martinez, P. A., Musi, N., Nie, J. & Shi, Y., Jun 1 2019, In : Aging Cell. 18, 3, e12941.

Research output: Contribution to journalArticle

Open Access
Parkinson Disease
Mitochondrial Degradation

Cardiovascular, electrophysiologic, and hematologic effects of omega-3 fatty acids beyond reducing hypertriglyceridemia: As it pertains to the recently published REDUCE-IT trial

Sheikh, O., Vande Hei, A. G., Battisha, A., Hammad, T., Pham, S. & Chilton, R. J., Jun 24 2019, In : Cardiovascular Diabetology. 18, 1, 84.

Research output: Contribution to journalReview article

Open Access
Omega-3 Fatty Acids
Heart Diseases
Numbers Needed To Treat
Eicosapentaenoic Acid

Cardiovascular Risk Assessment Varies Widely by Calculator and Race/Ethnicity in a Majority Latinx Cohort Living with HIV

Liang, Y., Ketchum, N. S., Turner, B. J., Flores, J., Bullock, D. E., Villarreal, R., Noël, P. H., Yin, M. T. & Taylor, B., Jan 1 2019, In : Journal of Immigrant and Minority Health.

Research output: Contribution to journalArticle

Cardiovascular Diseases
Anti-HIV Agents

Career Goals, Salary Expectations, and Salary Negotiation among Male and Female General Surgery Residents

Gray, K., Neville, A., Kaji, A. H., Wolfe, M., Calhoun, K., Amersi, F., Donahue, T., Arnell, T., Jarman, B., Inaba, K., Melcher, M., Morris, J. B., Smith, B., Reeves, M., Gauvin, J., Salcedo, E. S., Sidwell, R., Murayama, K., Damewood, R., Poola, V. P. & 2 others, Dent, D. L. & De Virgilio, C., Jan 1 2019, (Accepted/In press) In : JAMA Surgery.

Research output: Contribution to journalArticle

Salaries and Fringe Benefits
Working Women
Outcome Assessment (Health Care)

Caregivers of individuals with schizophrenia: who are they and what are their challenges?

Kamil, S. H. & Velligan, D. I., May 1 2019, In : Current opinion in psychiatry. 32, 3, p. 157-163 7 p.

Research output: Contribution to journalArticle

Financial Support
Social Support
Psychological Adaptation

Case Report of a Program to Enhance Dental Students' Interest in Academic Dentistry

Hendricson, W. D., Seitz, S. D. & English, D. K., Sep 1 2019, In : Journal of dental education. 83, 9, p. 1047-1056 10 p.

Research output: Contribution to journalArticle

Dental Students
3 Citations (Scopus)

Cause or casualty: The role of mitochondrial DNA in aging and age-associated disease

Chocron, E. S., Munkácsy, E. & Pickering, A. M., Feb 1 2019, In : Biochimica et Biophysica Acta - Molecular Basis of Disease. 1865, 2, p. 285-297 13 p.

Research output: Contribution to journalReview article

Mitochondrial DNA
Mitochondrial Genome
Mitochondrial Genes
Oxidative Phosphorylation

CCI 2019 CIT special issue

Bailey, S. R., Feb 15 2019, In : Catheterization and Cardiovascular Interventions. 93, S1, 1 p.

Research output: Contribution to journalEditorial

CeL-ID: Cell line identification using RNA-seq data

Mohammad, T. A., Tsai, Y. S., Ameer, S., Chen, H. I. H., Chiu, Y. C. & Chen, Y., Feb 4 2019, In : BMC Genomics. 20, 5371.

Research output: Contribution to journalArticle

Cell Line
Quality Control
Linear Models

Cell-autonomous and non-autonomous roles of daf-16 in muscle function and mitochondrial capacity in aging C. elegans

Wang, H., Webster, P., Chen, L. & Fisher, A. L., Apr 30 2019, In : Aging. 11, 8, p. 2295-2311 17 p.

Research output: Contribution to journalArticle

Adenosine Triphosphate
Muscle Strength
Skeletal Muscle

Cellular refractive index comparison of various prostate cancer and noncancerous cell lines via photonic-crystal biosensor

Deluna, F., Cadena, M., Wang, B., Sun, L. & Ye, J. Y., Jan 1 2019, Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues XVII. Farkas, D. L., Tarnok, A. & Leary, J. F. (eds.). SPIE, 108810K. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10881).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Optics and Photonics
Biosensing Techniques
Photonic crystals

CENP-A ubiquitylation contributes to maintaining the chromosomal location of the centromere

Niikura, Y., Kitagawa, R. & Kitagawa, K., Jan 22 2019, In : Molecules. 24, 3, 402.

Research output: Contribution to journalArticle

Cullin Proteins
Chromosome Segregation

CENP-A Ubiquitylation Is Indispensable to Cell Viability

Niikura, Y., Kitagawa, R., Fang, L. & Kitagawa, K., Jan 1 2019, (Accepted/In press) In : Developmental Cell.

Research output: Contribution to journalArticle

Cell Survival
centromere protein A

Change in Crown-to-Implant Ratio of Implants Placed in Grafted and Nongrafted Posterior Maxillary Sites: A 5-year Prospective Randomized Study

Nedir, R., Nurdin, N., Huynh-ba, G. & Bischof, M., Sep 1 2019, In : The International journal of oral & maxillofacial implants. 34, 5, p. 1231-1236 6 p.

Research output: Contribution to journalArticle

Prospective Studies
Bone and Bones
Linear Models

Changes in the gut microbiome and fermentation products concurrent with enhanced longevity in acarbose-treated mice

Smith, B. J., Miller, R. A., Ericsson, A. C., Harrison, D. C., Strong, J. R. & Schmidt, T. M., Jun 13 2019, In : BMC Microbiology. 19, 1, 130.

Research output: Contribution to journalArticle

Open Access
Volatile Fatty Acids
1 Citation (Scopus)

Characteristics and Outcomes of Liver Transplantation for Primary Biliary Cholangitis in Young Patients: Analysis of the United Network for Organ Sharing Database

Singh, A., Fritze, D., Mansouri, M., Lopez, R., Poordad, F., Lawitz, E., Cigarroa, F. G., Halff, G. A. & Alkhouri, N., Jun 1 2019, In : Transplantation. 103, 6, p. 1191-1198 8 p.

Research output: Contribution to journalArticle

Liver Transplantation
Mechanical Ventilators
1 Citation (Scopus)

Characterization of a novel 3D printed patient specific phantom for quality assurance in cranial stereotactic radiosurgery applications

Makris, D. N., Pappas, E. P., Zoros, E., Papanikolaou, N., Saenz, D. L., Kalaitzakis, G., Zourari, K., Efstathopoulos, E., Maris, T. G. & Pappas, E., May 10 2019, In : Physics in Medicine and Biology. 64, 10, 105009.

Research output: Contribution to journalArticle

Film Dosimetry
Bone and Bones

Characterization of a novel murine Sost ER T2 Cre model targeting osteocytes

Maurel, D. B., Matsumoto, T., Vallejo, J. A., Johnson, M. L., Dallas, S. L., Kitase, Y., Brotto, M., Wacker, M. J., Harris, M. A., Harris, S. E. & Bonewald, L. F., Dec 1 2019, In : Bone Research. 7, 1, 6.

Research output: Contribution to journalArticle

Open Access
Bone and Bones
2 Citations (Scopus)

Characterization of pediatric hepatocellular carcinoma reveals genomic heterogeneity and diverse signaling pathway activation

Haines, K., Sarabia, S. F., Alvarez, K. R., Tomlinson, G., Vasudevan, S. A., Heczey, A. A., Roy, A., Finegold, M. J., Parsons, D. W., Plon, S. E. & López-Terrada, D., Jan 1 2019, In : Pediatric Blood and Cancer. e27745.

Research output: Contribution to journalArticle

Hepatocellular Carcinoma
Liver Diseases
3 Citations (Scopus)

Chemically synthesized Secoisolariciresinol diglucoside (LGM2605) improves mitochondrial function in cardiac myocytes and alleviates septic cardiomyopathy

Kokkinaki, D., Hoffman, M., Kalliora, C., Kyriazis, I. D., Maning, J., Lucchese, A. M., Shanmughapriya, S., Tomar, D., Park, J. Y., Wang, H., Yang, X. F., Muniswamy, M., Lymperopoulos, A., Koch, W. J., Christofidou-Solomidou, M. & Drosatos, K., Feb 1 2019, In : Journal of Molecular and Cellular Cardiology. 127, p. 232-245 14 p.

Research output: Contribution to journalArticle

Cardiac Myocytes
Reactive Oxygen Species

Chemoradiation Vs Radical Cystectomy for Muscle-invasive Bladder Cancer: A Propensity Score-weighted Comparative Analysis Using the National Cancer Database

Kaushik, D., Wang, H., Michalek, J. E., Liss, M. A., Liu, Q., Jha, R. P., Svatek, R. & Mansour, A. M., Jan 1 2019, (Accepted/In press) In : Urology.

Research output: Contribution to journalArticle

Propensity Score
Urinary Bladder Neoplasms

Chickens' growth performance and pancreas development exposed to soy cake varying in trypsin inhibitor activity, heat-degraded lysine concentration, and protein solubility in potassium hydroxide

Hoffmann, D., Thurner, S., Ankerst, D. P., Damme, K., Windisch, W. & Brugger, D., Jun 1 2019, In : Poultry science. 98, 6, p. 2489-2499 11 p.

Research output: Contribution to journalArticle

soybean cake
potassium hydroxide
protein solubility
trypsin inhibitors
1 Citation (Scopus)

Chlamydia muridarum induces pathology in the female upper genital tract via distinct mechanisms

Yu, H., Lin, H., Xie, L., Tang, L., Chen, J., Zhou, Z., Ni, J. & Zhong, G., Jan 1 2019, In : Infection and Immunity. 87, 8, e00145.

Research output: Contribution to journalArticle

Chlamydia muridarum
Inbred C57BL Mouse
3 Citations (Scopus)

Chronic lung allograft dysfunction: Definition and update of restrictive allograft syndrome―A consensus report from the Pulmonary Council of the ISHLT

Glanville, A. R., Verleden, G. M., Todd, J. L., Benden, C., Calabrese, F., Gottlieb, J., Hachem, R. R., Levine, D. J., Meloni, F., Palmer, S. M., Roman, A., Sato, M., Singer, L. G., Tokman, S., Verleden, S. E., von der Thüsen, J., Vos, R. & Snell, G., May 1 2019, In : Journal of Heart and Lung Transplantation. 38, 5, p. 483-492 10 p.

Research output: Contribution to journalEditorial

2 Citations (Scopus)

Circulating fibroblast growth factor 23 levels and incident dementia: The Framingham heart study

McGrath, E. R., Himali, J. J., Levy, D., Conner, S. C., Pase, M. P., Abraham, C. R., Courchesne, P., Satizabal, C. L., Vasan, R. S., Beiser, A. S. & Seshadri, S., Mar 1 2019, In : PloS one. 14, 3, e0213321.

Research output: Contribution to journalArticle

Open Access
fibroblast growth factors
Alzheimer disease

Circulating miR-338 Cluster activities on osteoblast differentiation: Potential diagnostic and therapeutic targets for postmenopausal osteoporosis

Lin, C., Yu, S., Jin, R., Xiao, Y., Pan, M., Pei, F., Zhu, X., Huang, H., Zhang, Z., Chen, S., Liu, H. & Chen, Z., Jan 1 2019, In : Theranostics. 9, 13, p. 3780-3797 18 p.

Research output: Contribution to journalArticle

Open Access
Postmenopausal Osteoporosis

Cis-regulatory genetic variants in the CCR5 gene and natural HIV-1 control in black South Africans

Koor, G. W., Paximadis, M., Picton, A. C. P., Karatas, F., Loubser, S. A., He, W., Ahuja, S. K., Chaisson, R. E., Martinson, N., Ebrahim, O. & Tiemessen, C. T., Aug 1 2019, In : Clinical Immunology. 205, p. 16-24 9 p.

Research output: Contribution to journalArticle

Single Nucleotide Polymorphism
Nucleic Acid Regulatory Sequences
2 Citations (Scopus)

Classification of paroxysmal events and the four-dimensional epilepsy classification system

Lüders, H., Vaca, G. F. B., Akamatsu, N., Amina, S., Arzimanoglou, A., Baumgartner, C., Benbadis, S. R., Bleasel, A., Bermeo-Ovalle, A., Bozorgi, A., Carreño, M., Devereaux, M., Francione, S., Losarcos, N. G., Hamer, H., Holthausen, H., Jamal-Omidi, S., Kalamangalam, G., Kanner, A. M., Knake, S. & 20 others, Lacuey, N., Lhatoo, S., Lim, S. H., Londoño, L. V., Mani, J., Matsumoto, R., Miller, J. P., Noachtar, S., Palmini, A., Park, J., Rosenow, F., Shahid, A., Schuele, S., Steinhoff, B. J., Szabo, C. A., Tandon, N., Terada, K., van Emde Boas, W., Widdess-Walsh, P. & Kahane, P., Feb 1 2019, In : Epileptic Disorders. 21, 1, p. 1-29 29 p.

Research output: Contribution to journalArticle

Hospital Emergency Service

Clinical Epidemiology of COPD: Insights From 10 Years of the COPDGene Study

Maselli, D. J., Bhatt, S. P., Anzueto, A. R., Bowler, R. P., DeMeo, D. L., Diaz, A. A., Dransfield, M. T., Fawzy, A., Foreman, M. G., Hanania, N. A., Hersh, C. P., Kim, V., Kinney, G. L., Putcha, N., Wan, E. S., Wells, J. M., Westney, G. E., Young, K. A., Silverman, E. K., Han, M. L. K. & 1 others, Make, B. J., Aug 1 2019, In : Chest. 156, 2, p. 228-238 11 p.

Research output: Contribution to journalReview article

Chronic Obstructive Pulmonary Disease
Molecular Epidemiology
Chronic Bronchitis

Clinical evaluation of a two-dimensional liquid-filled ion chamber detector array for verification of high modulation small fields in radiotherapy

Markovic, M., Narayanasamy, G., Stathakis, S., Mavroidis, P., Jurkovic, I. A., Saenz, D. & Papanikolaou, N., Apr 1 2019, In : Journal of Medical Physics. 44, 2, p. 91-98 8 p.

Research output: Contribution to journalArticle

Equipment and Supplies

Clinical Outcomes and Cost Comparisons of Stent and Non-Stent Interventions in Infrainguinal Peripheral Artery Disease: Insights From the Excellence in Peripheral Artery Disease (XLPAD) Registry

Banerjee, S., Jeon-Slaughter, H., Armstrong, E. J., Bajzer, C., Abu-Fadel, M., Khalili, H., Prasad, A., Bou Dargham, B., Kamath, P., Addo, T., Luna, M., Gigliotti, O., Foteh, M., Cawich, I., Kinlay, S., Ali, M., Ramanan, B., Niazi, K., Tsai, S., Shammas, N. W. & 1 others, Brilakis, E. S., Jan 1 2019, In : The Journal of invasive cardiology. 31, 1, p. 1-9 9 p.

Research output: Contribution to journalArticle

Peripheral Arterial Disease
Costs and Cost Analysis

Clostridium difficile infection risk with important antibiotic classes: An analysis of the FDA adverse event reporting system

Teng, C., Reveles, K. R., Obodozie-Ofoegbu, O. O. & Frei, C., Jan 1 2019, In : International Journal of Medical Sciences. 16, 5, p. 630-635 6 p.

Research output: Contribution to journalArticle

Open Access
Clostridium Infections
Clostridium difficile
Anti-Bacterial Agents