Datasets
- 25 - 50 out of 75 results
Search results
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Additional file 1: Figure S1. of A hierarchical model for clustering m6A methylation peaks in MeRIP-seq data
Cui, X. (Contributor), Meng, J. (Creator), Zhang, S. (Contributor), Rao, M. K. (Creator), Chen, Y. (Contributor) & Huang, Y. (Contributor), Figshare, 2016
DOI: 10.6084/m9.figshare.c.3645446_d3.v1, https://springernature.figshare.com/articles/figure/Additional_file_1_Figure_S1_of_A_hierarchical_model_for_clustering_m6A_methylation_peaks_in_MeRIP-seq_data/4472081/1
Dataset
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Additional file 3: Figure S3. of A hierarchical model for clustering m6A methylation peaks in MeRIP-seq data
Cui, X. (Contributor), Meng, J. (Creator), Zhang, S. (Contributor), Rao, M. K. (Creator), Chen, Y. (Contributor) & Huang, Y. (Contributor), Figshare, 2016
DOI: 10.6084/m9.figshare.c.3645446_d2, https://springernature.figshare.com/articles/figure/Additional_file_3_Figure_S3_of_A_hierarchical_model_for_clustering_m6A_methylation_peaks_in_MeRIP-seq_data/4472078
Dataset
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The Estrogen Receptor Co-Regulator Protein, Proline Glutamic Acid and Leucine Rich Protein 1 (PELP1) Mediates Estrogen Rapid Signaling and Neuroprotection in the Brain
Zhang, Q. (Contributor), Wang, R. (Contributor), Scott, E. (Contributor), Zou, Y. (Contributor), Chen, Y. (Contributor), Dong, Y. (Contributor) & Brann, D. (Contributor), ArrayExpress, 2015
https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-72136
Dataset
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Short-term rapamycin treatment in mice have few effects on the transcriptome of white adipose tissue compared to dietary restriction
Livi, C. (Contributor), Bokov, A. (Contributor), Yu, Z. (Contributor), Chen, Y. (Contributor) & Richardson, A. (Contributor), ArrayExpress, 2014
https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-52825
Dataset
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microRNA-449a functions as a tumor suppressor in neuroblastoma through inducing cell differentiation and cell cycle arrest
Zhao, Z. (Contributor), Ma, X. (Contributor), Sung, D. (Creator), Li, M. (Creator), Kosti, A. (Creator), Lin, G. (Creator), Chen, Y. (Contributor), Pertsemlidis, A. (Creator), Hsiao, T.-H. (Contributor) & Du, L. (Contributor), Taylor & Francis, 2015
DOI: 10.6084/m9.figshare.1332512.v1, https://tandf.figshare.com/articles/dataset/microRNA_449a_functions_as_a_tumor_suppressor_in_neuroblastoma_through_inducing_cell_differentiation_and_cell_cycle_arrest/1332512/1
Dataset
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Additional file 2: Table S2. of A simple gene set-based method accurately predicts the synergy of drug pairs
Hsu, Y.-C. (Contributor), Chiu, Y.-C. (Contributor), Chen, Y. (Contributor), Hsiao, T.-H. (Contributor) & Chuang, E. Y. (Creator), Figshare, 2016
DOI: 10.6084/m9.figshare.c.3606356_d1.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_Table_S2_of_A_simple_gene_set-based_method_accurately_predicts_the_synergy_of_drug_pairs/4348421/1
Dataset
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GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization
Chen, H.-I. H. (Contributor), Chiu, Y.-C. (Contributor), Zhang, T. (Contributor), Zhang, S. (Contributor), Huang, Y. (Contributor) & Chen, Y. (Contributor), Figshare, 2018
DOI: 10.6084/m9.figshare.c.4345790.v1, https://springernature.figshare.com/collections/GSAE_an_autoencoder_with_embedded_gene-set_nodes_for_genomics_functional_characterization/4345790/1
Dataset
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Additional file 12 of Age-associated genes in human mammary gland drive human breast cancer progression
Gu, X. (Creator), Wang, B. (Contributor), Zhu, H. (Contributor), Zhou, Y. (Creator), Horning, A. M. (Creator), Huang, T.H.-M. (Creator), Chen, Y. (Contributor), Houghton, P. (Creator), Lai, Z. (Creator), Michalek, J. E. (Creator) & Sun, L.-Z. (Creator), Figshare, 2020
DOI: 10.6084/m9.figshare.12487334, https://springernature.figshare.com/articles/Additional_file_12_of_Age-associated_genes_in_human_mammary_gland_drive_human_breast_cancer_progression/12487334
Dataset
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Age-associated genes in human mammary gland drive human breast cancer progression
Gu, X. (Creator), Wang, B. (Contributor), Zhu, H. (Contributor), Zhou, Y. (Creator), Horning, A. M. (Creator), Huang, T.H.-M. (Creator), Chen, Y. (Contributor), Houghton, P. (Creator), Lai, Z. (Creator), Michalek, J. E. (Creator) & Sun, L.-Z. (Creator), Figshare, 2020
DOI: 10.6084/m9.figshare.c.5022674, https://springernature.figshare.com/collections/Age-associated_genes_in_human_mammary_gland_drive_human_breast_cancer_progression/5022674
Dataset
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ChIP-seq analysis of PHF20 and Wdr5 binding sites in ESCs
Zhao, W. (Contributor), Li, Q. (Contributor), Ayers, S. (Contributor), Gu, Y. (Contributor), Shi, Z. (Contributor), Zhu, Q. (Contributor) & Chen, Y. (Contributor), ArrayExpress, 2013
https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-43247
Dataset
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GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization
Chen, H.-I. H. (Contributor), Chiu, Y.-C. (Contributor), Zhang, T. (Contributor), Zhang, S. (Contributor), Huang, Y. (Contributor) & Chen, Y. (Contributor), Figshare, 2018
DOI: 10.6084/m9.figshare.c.4345790, https://springernature.figshare.com/collections/GSAE_an_autoencoder_with_embedded_gene-set_nodes_for_genomics_functional_characterization/4345790
Dataset
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Additional file 2: Table S2. of A simple gene set-based method accurately predicts the synergy of drug pairs
Hsu, Y.-C. (Contributor), Chiu, Y.-C. (Contributor), Chen, Y. (Contributor), Hsiao, T.-H. (Contributor) & Chuang, E. Y. (Creator), Figshare, 2016
DOI: 10.6084/m9.figshare.c.3606356_d1, https://springernature.figshare.com/articles/dataset/Additional_file_2_Table_S2_of_A_simple_gene_set-based_method_accurately_predicts_the_synergy_of_drug_pairs/4348421
Dataset
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An ancestry informative marker panel design for individual ancestry estimation of Hispanic population using whole exome sequencing data
Wang, L.-J. (Creator), Zhang, C. W. (Creator), Su, S. C. (Creator), Chen, H.-I. H. (Contributor), Chiu, Y.-C. (Contributor), Lai, Z. (Creator), Bouamar, H. (Creator), Ramirez, A. G. (Creator), Cigarroa, F. G. (Creator), Sun, L.-Z. (Contributor) & Chen, Y. (Contributor), Figshare, 2019
DOI: 10.6084/m9.figshare.c.4801215, https://springernature.figshare.com/collections/An_ancestry_informative_marker_panel_design_for_individual_ancestry_estimation_of_Hispanic_population_using_whole_exome_sequencing_data/4801215
Dataset
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Additional file 12 of Age-associated genes in human mammary gland drive human breast cancer progression
Gu, X. (Creator), Wang, B. (Contributor), Zhu, H. (Contributor), Zhou, Y. (Creator), Horning, A. M. (Creator), Huang, T.H.-M. (Creator), Chen, Y. (Contributor), Houghton, P. (Creator), Lai, Z. (Creator), Michalek, J. E. (Creator) & Sun, L.-Z. (Creator), Figshare, 2020
DOI: 10.6084/m9.figshare.12487334.v1, https://springernature.figshare.com/articles/Additional_file_12_of_Age-associated_genes_in_human_mammary_gland_drive_human_breast_cancer_progression/12487334/1
Dataset
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Additional file 13 of Age-associated genes in human mammary gland drive human breast cancer progression
Gu, X. (Creator), Wang, B. (Contributor), Zhu, H. (Contributor), Zhou, Y. (Creator), Horning, A. M. (Creator), Huang, T.H.-M. (Creator), Chen, Y. (Contributor), Houghton, P. (Creator), Lai, Z. (Creator), Michalek, J. E. (Creator) & Sun, L.-Z. (Creator), Figshare, 2020
DOI: 10.6084/m9.figshare.12487349.v1, https://springernature.figshare.com/articles/Additional_file_13_of_Age-associated_genes_in_human_mammary_gland_drive_human_breast_cancer_progression/12487349/1
Dataset
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shinyDeepDR: a user-friendly R Shiny app for predicting anti-cancer drug response using deep learning
Wang, L.-J. (Creator), Ning, M. (Creator), Nayak, T. (Creator), Kasper, M. J. (Contributor), Monga, S. P. (Creator), Huang, Y. (Creator), Chen, Y. (Creator) & Chiu, Y.-C. (Creator), Figshare, 2024
DOI: 10.6084/m9.figshare.23925255, https://figshare.com/articles/software/_b_shinyDeepDR_a_user-friendly_R_Shiny_app_for_predicting_anti-cancer_drug_response_using_deep_learning_b_/23925255
Dataset
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CancerSiamese: one-shot learning for predicting primary and metastatic tumor types unseen during model training
Mostavi, M. (Creator), Chiu, Y.-C. (Contributor), Chen, Y. (Contributor) & Huang, Y. (Creator), Figshare, 2021
DOI: 10.6084/m9.figshare.c.5422418, https://springernature.figshare.com/collections/CancerSiamese_one-shot_learning_for_predicting_primary_and_metastatic_tumor_types_unseen_during_model_training/5422418
Dataset
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SETDB1 interactions with PELP1 contributes to breast cancer endocrine therapy resistance
Liu, Z. (Creator), Liu, J. (Creator), Ebrahimi, B. (Creator), Pratap, U. P. (Creator), He, Y. (Creator), Altwegg, K. A. (Creator), Tang, W. (Creator), Li, X. (Creator), Lai, Z. (Creator), Chen, Y. (Creator), Shen, L. (Creator), Sareddy, G. R. (Creator), Viswanadhapalli, S. (Creator), Tekmal, R. R. (Creator), Rao, M. K. (Creator) & Vadlamudi, R. K. (Creator), Figshare, 2022
DOI: 10.6084/m9.figshare.c.5939816.v1, https://springernature.figshare.com/collections/SETDB1_interactions_with_PELP1_contributes_to_breast_cancer_endocrine_therapy_resistance/5939816/1
Dataset
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microRNA-449a functions as a tumor suppressor in neuroblastoma through inducing cell differentiation and cell cycle arrest
Zhao, Z. (Contributor), Ma, X. (Contributor), Sung, D. (Creator), Li, M. (Creator), Kosti, A. (Creator), Lin, G. (Creator), Chen, Y. (Contributor), Pertsemlidis, A. (Creator), Hsiao, T.-H. (Contributor) & Du, L. (Contributor), Taylor & Francis, 2015
DOI: 10.6084/m9.figshare.1332512.v4, https://tandf.figshare.com/articles/dataset/microRNA_449a_functions_as_a_tumor_suppressor_in_neuroblastoma_through_inducing_cell_differentiation_and_cell_cycle_arrest/1332512/4
Dataset
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Additional file 1: Table S1. of A simple gene set-based method accurately predicts the synergy of drug pairs
Hsu, Y.-C. (Contributor), Chiu, Y.-C. (Contributor), Chen, Y. (Contributor), Hsiao, T.-H. (Contributor) & Chuang, E. Y. (Creator), Figshare, 2016
DOI: 10.6084/m9.figshare.c.3606356_d2.v1, https://springernature.figshare.com/articles/dataset/Additional_file_1_Table_S1_of_A_simple_gene_set-based_method_accurately_predicts_the_synergy_of_drug_pairs/4348436/1
Dataset
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Additional file 2 of CancerSiamese: one-shot learning for predicting primary and metastatic tumor types unseen during model training
Mostavi, M. (Creator), Chiu, Y.-C. (Contributor), Chen, Y. (Contributor) & Huang, Y. (Creator), Figshare, 2021
DOI: 10.6084/m9.figshare.14583635, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_CancerSiamese_one-shot_learning_for_predicting_primary_and_metastatic_tumor_types_unseen_during_model_training/14583635
Dataset
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Additional file 1: of GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization
Chen, H.-I. H. (Contributor), Chiu, Y.-C. (Contributor), Zhang, T. (Contributor), Zhang, S. (Contributor), Huang, Y. (Contributor) & Chen, Y. (Contributor), Figshare, 2018
DOI: 10.6084/m9.figshare.7502822, https://springernature.figshare.com/articles/Additional_file_1_of_GSAE_an_autoencoder_with_embedded_gene-set_nodes_for_genomics_functional_characterization/7502822
Dataset
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Additional file 2: of CeL-ID: cell line identification using RNA-seq data
Mohammad, T. A. (Contributor), Tsai, Y. S. (Creator), Ameer, S. (Contributor), Chen, H.-I. H. (Contributor), Chiu, Y.-C. (Contributor) & Chen, Y. (Contributor), Figshare, 2019
DOI: 10.6084/m9.figshare.7666778, https://springernature.figshare.com/articles/Additional_file_2_of_CeL-ID_cell_line_identification_using_RNA-seq_data/7666778
Dataset
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Differential correlation analysis of glioblastoma reveals immune ceRNA interactions predictive of patient survival
Chiu, Y.-C. (Contributor), Wang, L.-J. (Creator), Lu, T.-P. (Contributor), Hsiao, T.-H. (Contributor), Chuang, E. Y. (Creator) & Chen, Y. (Contributor), Figshare, 2017
DOI: 10.6084/m9.figshare.c.3704557, https://figshare.com/collections/Differential_correlation_analysis_of_glioblastoma_reveals_immune_ceRNA_interactions_predictive_of_patient_survival/3704557
Dataset
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Additional file 1: Table S1. of A simple gene set-based method accurately predicts the synergy of drug pairs
Hsu, Y.-C. (Contributor), Chiu, Y.-C. (Contributor), Chen, Y. (Contributor), Hsiao, T.-H. (Contributor) & Chuang, E. Y. (Creator), Figshare, 2016
DOI: 10.6084/m9.figshare.c.3606356_d2, https://springernature.figshare.com/articles/dataset/Additional_file_1_Table_S1_of_A_simple_gene_set-based_method_accurately_predicts_the_synergy_of_drug_pairs/4348436
Dataset