Research output per year
Research output per year
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Dive into the research topics where Yidong Chen is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Antibody-Mediated Targeting of Secretory Protein SCUBE3 Suppresses Cancer Progression by Inhibiting Oncogenic Signaling and Inducing Antitumor Immunity
Singh, D., Onyeagucha, B. C., Medina, D., Subbarayalu, P., Mojidra, R., Lv, D., Bhandari, M., Timilsina, S., Pitta Venkata, P., Huang, J. Y., Nirzhor, S., Abdulsahib, S., Prochnau, J. Y., Do, C. T. P., Rajamanickam, S., Chen, Y., Taylor, A. B., Viswanadhapalli, S., Falzone, M. E. & Jiang, J. & 5 others, , Mar 2 2026, In: Cancer Research. 86, 5, p. 1252-1268 17 p.Research output: Contribution to journal › Article › peer-review
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Exercise and Phellodendron amurense extract differentially impinge on oxidative stress response pathways in a mouse model of prostate cancer
Patel, D., Rivas, P., Chen, Y., Lai, Z., Ikeno, Y., Kumar, A. P. & Ghosh, R., Dec 2026, In: Scientific reports. 16, 1, 12137.Research output: Contribution to journal › Article › peer-review
Open Access -
Predicting and interpreting protein and phosphoprotein abundance from pan-cancer and single-cell transcriptomes
Tsai, H. M., Hsiao, T. H., Chiu, Y. C., Huang, Y., Chuang, E. Y. & Chen, Y., Mar 20 2026, In: iScience. 29, 3, 114815.Research output: Contribution to journal › Article › peer-review
Open Access -
Resolution of R-loops and transcription–replication conflicts by SETX–BRCA1–BARD1 complex
Dutta, A., Ji, J. H., Syed, S., Fang, Q., Mukhopadhyay, P., Wang, H., Loranc, E., Medina, D., Abdulsahib, S., Zhou, S., Tovar, M., Wang, J., Benoit, J. M., Liang, F., Tomimatsu, N., Nyalwidhe, J. O., Dray, E., Verway-Cohen, A., McDonald, D. T. & de la Peña Avalos, B. & 19 others, , Apr 2026, In: Nature Structural and Molecular Biology. 33, 4, p. 615-630 16 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Selective elimination of circulating effector CD8 T cells via LTβR blockade separates anti-CD137 efficacy from toxicity
Shein, S. A., Korchagina, A. A., Wang, L. J., Lai, Z., Chen, Y., Fisher, J. S., Ludewig, B., Lancaster, J. N., Fu, Y. X., Koroleva, E. & Tumanov, A. V., 2026, In: Science Advances. 12, 17, p. 1-19 19 p., eaea8737.Research output: Contribution to journal › Article › peer-review
Open Access
Datasets
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Additional file 3: of GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization
Chen, H.-I. H. (Contributor), Chiu, Y.-C. (Contributor), Zhang, T. (Contributor), Zhang, S. (Contributor), Huang, Y. (Contributor) & Chen, Y. (Contributor), Figshare, 2018
DOI: 10.6084/m9.figshare.7502834.v1, https://springernature.figshare.com/articles/Additional_file_3_of_GSAE_an_autoencoder_with_embedded_gene-set_nodes_for_genomics_functional_characterization/7502834/1
Dataset
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Additional file 1: Table S1. of A simple gene set-based method accurately predicts the synergy of drug pairs
Hsu, Y.-C. (Contributor), Chiu, Y.-C. (Contributor), Chen, Y. (Contributor), Hsiao, T.-H. (Contributor) & Chuang, E. Y. (Creator), Figshare, 2016
DOI: 10.6084/m9.figshare.c.3606356_d2.v1, https://springernature.figshare.com/articles/dataset/Additional_file_1_Table_S1_of_A_simple_gene_set-based_method_accurately_predicts_the_synergy_of_drug_pairs/4348436/1
Dataset
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Additional file 1: of GSAE: an autoencoder with embedded gene-set nodes for genomics functional characterization
Chen, H.-I. H. (Contributor), Chiu, Y.-C. (Contributor), Zhang, T. (Contributor), Zhang, S. (Contributor), Huang, Y. (Contributor) & Chen, Y. (Contributor), Figshare, 2018
DOI: 10.6084/m9.figshare.7502822, https://springernature.figshare.com/articles/Additional_file_1_of_GSAE_an_autoencoder_with_embedded_gene-set_nodes_for_genomics_functional_characterization/7502822
Dataset
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Additional file 2: of CeL-ID: cell line identification using RNA-seq data
Mohammad, T. A. (Contributor), Tsai, Y. S. (Creator), Ameer, S. (Contributor), Chen, H.-I. H. (Contributor), Chiu, Y.-C. (Contributor) & Chen, Y. (Contributor), Figshare, 2019
DOI: 10.6084/m9.figshare.7666778.v1, https://springernature.figshare.com/articles/Additional_file_2_of_CeL-ID_cell_line_identification_using_RNA-seq_data/7666778/1
Dataset
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Differential correlation analysis of glioblastoma reveals immune ceRNA interactions predictive of patient survival
Chiu, Y.-C. (Contributor), Wang, L.-J. (Creator), Lu, T.-P. (Contributor), Hsiao, T.-H. (Contributor), Chuang, E. Y. (Creator) & Chen, Y. (Contributor), Figshare, 2017
DOI: 10.6084/m9.figshare.c.3704557, https://figshare.com/collections/Differential_correlation_analysis_of_glioblastoma_reveals_immune_ceRNA_interactions_predictive_of_patient_survival/3704557
Dataset