Habil Zare

  • Source: Scopus
  • Calculated based on no. of publications stored in Pure and citations from Scopus
20102021

Research activity per year

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Search results

  • 2021

    Two-Step Imputation and AdaBoost-Based Classification for Early Prediction of Sepsis on Imbalanced Clinical Data

    Baniasadi, A., Rezaeirad, S., Zare, H. & Ghassemi, M. M., Jan 1 2021, In: Critical care medicine. 49, 1, p. e91-e97

    Research output: Contribution to journalArticlepeer-review

  • 2020

    Genetic correlations and genome-wide associations of cortical structure in general population samples of 22,824 adults

    Hofer, E., Roshchupkin, G. V., Adams, H. H. H., Knol, M. J., Lin, H., Li, S., Zare, H., Ahmad, S., Armstrong, N. J., Satizabal, C. L., Bernard, M., Bis, J. C., Gillespie, N. A., Luciano, M., Mishra, A., Scholz, M., Teumer, A., Xia, R., Jian, X., Mosley, T. H. & 363 others, Saba, Y., Pirpamer, L., Seiler, S., Becker, J. T., Carmichael, O., Rotter, J. I., Psaty, B. M., Lopez, O. L., Amin, N., van der Lee, S. J., Yang, Q., Himali, J. J., Maillard, P., Beiser, A. S., Decarli, C., Karama, S., Lewis, L., Harris, M., Bastin, M. E., Deary, I. J., Witte, A. V., Beyer, F., Loeffler, M., Mather, K. A., Schofield, P. R., Thalamuthu, A., Kwok, J. B., Wright, M. J., Ames, D., Trollor, J., Jiang, J., Brodaty, H., Wen, W., Vernooij, M. W., Hofman, A., Uitterlinden, A. G., Niessen, W. J., Wittfeld, K., Bülow, R., Völker, U., Pausova, Z., Pike, G. B., Maingault, S., Crivello, F., Tzourio, C., Amouyel, P., Mazoyer, B., Neale, M. C., Franz, C. E., Lyons, M. J., Panizzon, M. S., Andreassen, O. A., Dale, A. M., Logue, M., Grasby, K. L., Jahanshad, N., Painter, J. N., Colodro-Conde, L., Bralten, J., Hibar, D. P., Lind, P. A., Pizzagalli, F., Stein, J. L., Thompson, P. M., Medland, S. E., Sachdev, P. S., Kremen, W. S., Wardlaw, J. M., Villringer, A., van Duijn, C. M., Grabe, H. J., Longstreth, W. T., Fornage, M., Paus, T., Debette, S., Ikram, M. A., Schmidt, H., Schmidt, R., Seshadri, S., Ching, C. R. K., McMahon, M. A. B., Shatokhina, N., Zsembik, L. C. P., Agartz, I., Alhusaini, S., Almeida, M. A. A., Alnæs, D., Amlien, I. K., Andersson, M., Ard, T., Ashley-Koch, A., Brouwer, R. M., Buimer, E. E. L., Bürger, C., Cannon, D. M., Chakravarty, M., Chen, Q., Cheung, J. W., Couvy-Duchesne, B., Dalvie, S., de Araujo, T. K., de Zubicaray, G. I., de Zwarte, S. M. C., Braber, A. D., Doan, N. T., Dohm, K., Ehrlich, S., Engelbrecht, H. R., Erk, S., Fan, C. C., Fedko, I. O., Foley, S. F., Ford, J. M., Fukunaga, M., Garrett, M. E., Ge, T., Giddaluru, S., Goldman, A. L., Groenewold, N. A., Grotegerd, D., Gurholt, T. P., Gutman, B. A., Hansell, N. K., Harris, M. A., Harrison, M. B., Haswell, C. C., Hauser, M., Herms, S., Heslenfeld, D. J., Ho, N. F., Hoehn, D., Hoffmann, P., Holleran, L., Hoogman, M., Hottenga, J. J., Ikeda, M., Janowitz, D., Jansen, I. E., Jia, T., Jockwitz, C., Kanai, R., Kasperaviciute, D., Kaufmann, T., Kelly, S., Kikuchi, M., Klein, M., Knapp, M., Knodt, A. R., Krämer, B., Lam, M., Lancaster, T. M., Lee, P. H., Lett, T. A., Lopes-Cendes, I., Macciardi, F., Marquand, A. F., Mathias, S. R., Melzer, T. R., Milaneschi, Y., Mirza-Schreiber, N., Moreira, J. C. V., Mühleisen, T. W., Müller-Myhsok, B., Najt, P., Nakahara, S., Nho, K., Olde Loohuis, L. M., Orfanos, D. P., Pearson, J. F., Pitcher, T. L., Pütz, B., Ragothaman, A., Rashid, F. M., Redlich, R., Reinbold, C. S., Repple, J., Richard, G., Riedel, B. C., Risacher, S. L., Rocha, C. S., Mota, N. R., Salminen, L., Saremi, A., Saykin, A. J., Schlag, F., Schmaal, L., Secolin, R., Shapland, C. Y., Shen, L., Shin, J., Shumskaya, E., Sønderby, I. E., Sprooten, E., Strike, L. T., Tansey, K. E., Thomopoulos, S. I., Tordesillas-Gutiérrez, D., Turner, J. A., Uhlmann, A., Vallerga, C. L., Meer, D. V. D., van Donkelaar, M. M. J., Eijk, L. V., van Erp, T. G. M., van Haren, N. E. M., Rooij, D. V., Tol, M. J. V., Veldink, J. H., Verhoef, E., Walton, E., Wang, M., Wang, Y., Westlye, L. T., Whelan, C. D., Witt, S. H., Wolf, C., Wolfers, T., Yasuda, C. L., Zaremba, D., Zhang, Z., Zhu, A. H., Zwiers, M. P., Artiges, E., Assareh, A. A., Ayesa-Arriola, R., Belger, A., Brandt, C. L., Brown, G. G., Cichon, S., Curran, J. E., Davies, G. E., Degenhardt, F., Dietsche, B., Djurovic, S., Doherty, C. P., Espiritu, R., Garijo, D., Gil, Y., Gowland, P. A., Green, R. C., Häusler, A. N., Heindel, W., Ho, B. C., Hoffmann, W. U., Holsboer, F., Homuth, G., Hosten, N., Jack, C. R., Jang, M., Jansen, A., Kolskår, K., Koops, S., Krug, A., Lim, K. O., Luykx, J. J., Mathalon, D. H., Mattay, V. S., Matthews, S., Van Son, J. M., McEwen, S. C., Melle, I., Morris, D. W., Mueller, B. A., Nauck, M., Nordvik, J. E., Nöthen, M. M., O’leary, D. S., Opel, N., Martinot, M. L. P., Preda, A., Quinlan, E. B., Ratnakar, V., Reppermund, S., Steen, V. M., Torres, F. R., Veltman, D. J., Voyvodic, J. T., Whelan, R., White, T., Yamamori, H., Alvim, M. K. M., Anderson, T. J., Arias-Vasquez, A., Baune, B. T., Blangero, J., Boomsma, D. I., Brunner, H. G., Buckner, R. L., Buitelaar, J. K., Bustillo, J. R., Cahn, W., Calhoun, V., Caseras, X., Caspers, S., Cavalleri, G. L., Cendes, F., Corvin, A., Crespo-Facorro, B., Dalrymple-Alford, J. C., Dannlowski, U., de Geus, E. J. C., Delanty, N., Depondt, C., Desrivières, S., Donohoe, G., Espeseth, T., Fernández, G., Fisher, S. E., Flor, H., Forstner, A. J., Francks, C., Franke, B., Glahn, D. C., Gollub, R. L., Gruber, O., Håberg, A. K., Hariri, A. R., Hartman, C. A., Hashimoto, R., Heinz, A., Hillegers, M. H. J., Hoekstra, P. J., Holmes, A. J., Hong, L. E., Hopkins, W. D., Hulshoff Pol, H. E., Jernigan, T. L., Jönsson, E. G., Kahn, R. S., Kennedy, M. A., Kircher, T. T. J., Kochunov, P., Le Hellard, S., Martin, N. G., Martinot, J. L., McDonald, C., McMahon, K. L., Meyer-Lindenberg, A., Morey, R. A., Nyberg, L., Oosterlaan, J., Ophoff, R. A., Penninx, B. W. J. H., Polderman, T. J. C., Posthuma, D., Rietschel, M., Roffman, J. L., Rowland, L. M., Sämann, P. G., Schumann, G., Sim, K., Sisodiya, S. M., Smoller, J. W., Sommer, I. E., Pourcain, B. S., Toga, A. W., Van der Wee, N. J. A., Van’T Ent, D., Völzke, H., Walter, H., Weber, B., Weinberger, D. R. & Zhou, J., Dec 1 2020, In: Nature communications. 11, 1, 4796.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Scopus citations
  • 2019

    C3HeB/FeJ Mice mimic many aspects of gene expression and pathobiological features of human hepatocellular carcinoma

    Zavadil, J. A., Herzig, M. C. S., Hildreth, K., Foroushani, A., Boswell, W., Walter, R., Reddick, R., White, H., Zare, H. & Walter, C. A., Mar 2019, In: Molecular Carcinogenesis. 58, 3, p. 309-320 12 p.

    Research output: Contribution to journalArticlepeer-review

    2 Scopus citations
  • 2018

    Applications of Bayesian network models in predicting types of hematological malignancies

    Agrahari, R., Foroushani, A., Docking, T. R., Chang, L., Duns, G., Hudoba, M., Karsan, A. & Zare, H., Dec 1 2018, In: Scientific reports. 8, 1, 6951.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    8 Scopus citations
  • Pathogenic tau-induced piRNA depletion promotes neuronal death through transposable element dysregulation in neurodegenerative tauopathies

    Sun, W., Samimi, H., Gamez, M., Zare, H. & Frost, B., Aug 1 2018, In: Nature Neuroscience. 21, 8, p. 1038-1048 11 p.

    Research output: Contribution to journalArticlepeer-review

    59 Scopus citations
  • 2017

    Fall detection using smartwatch sensor data with accessor architecture

    Ngu, A., Wu, Y., Zare, H., Polican, A., Yarbrough, B. & Yao, L., 2017, Smart Health - International Conference, ICSH 2017, Proceedings. Karahanna, E., Bardhan, I., Chen, H. & Zeng, D. D. (eds.). Springer Verlag, p. 81-93 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10347 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    16 Scopus citations
  • Large-scale gene network analysis reveals the significance of extracellular matrix pathway and homeobox genes in acute myeloid leukemia: An introduction to the Pigengene package and its applications

    Foroushani, A., Agrahari, R., Docking, R., Chang, L., Duns, G., Hudoba, M., Karsan, A. & Zare, H., Mar 16 2017, In: BMC Medical Genomics. 10, 1, 16.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    18 Scopus citations
  • Underexpression of specific interferon genes is associated with poor prognosis of melanoma

    Zainulabadeen, A., Yao, P. & Zare, H., Jan 2017, In: PloS one. 12, 1, e0170025.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    6 Scopus citations
  • 2014

    Inferring Clonal Composition from Multiple Sections of a Breast Cancer

    Zare, H., Wang, J., Hu, A., Weber, K., Smith, J., Nickerson, D., Song, C. Z., Witten, D., Blau, C. A. & Noble, W. S., Jul 2014, In: PLoS computational biology. 10, 7, e1003703.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    73 Scopus citations
  • 2013

    Critical assessment of automated flow cytometry data analysis techniques

    Aghaeepour, N., Finak, G., Hoos, H., Mosmann, T. R., Brinkman, R., Gottardo, R., Scheuermann, R. H., Dougall, D., Khodabakhshi, A. H., Mah, P., Obermoser, G., Spidlen, J., Taylor, I., Wuensch, S. A., Bramson, J., Eaves, C., Weng, A. P., Fortuno, E. S., Ho, K., Kollmann, T. R. & 74 others, Rogers, W., De Rosa, S., Dalai, B., Azad, A., Pothen, A., Brandes, A., Bretschneider, H., Bruggner, R., Finck, R., Jia, R., Zimmerman, N., Linderman, M., Dill, D., Nolan, G., Chan, C., Khettabi, F. E., O'Neill, K., Chikina, M., Ge, Y., Sealfon, S., Sugár, I., Gupta, A., Shooshtari, P., Zare, H., De Jager, P. L., Jiang, M., Keilwagen, J., Maisog, J. M., Luta, G., Barbo, A. A., Májek, P., Vilček, J., Manninen, T., Huttunen, H., Ruusuvuori, P., Nykter, M., McLachlan, G. J., Wang, K., Naim, I., Sharma, G., Nikolic, R., Pyne, S., Qian, Y., Qiu, P., Quinn, J., Roth, A., Meyer, P., Stolovitzky, G., Saez-Rodriguez, J., Norel, R., Bhattacharjee, M., Biehl, M., Bucher, P., Bunte, K., Di Camillo, B., Sambo, F., Sanavia, T., Trifoglio, E., Toffolo, G., Slavica Dimitrieva, S. D., Dreos, R., Ambrosini, G., Grau, J., Grosse, I., Posch, S., Guex, N., Kursa, M., Rudnicki, W., Liu, B., Maienschein-Cline, M., Schneider, P., Seifert, M., Strickert, M. & Vilar, J. M. G., Mar 2013, In: Nature Methods. 10, 3, p. 228-238 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    350 Scopus citations
  • Scoring relevancy of features based on combinatorial analysis of Lasso with application to lymphoma diagnosis

    Zare, H., Haffari, G., Gupta, A. & Brinkman, R. R., Jan 21 2013, In: BMC genomics. 14, S14.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    19 Scopus citations
  • 2012

    Automated analysis of multidimensional flow cytometry data improves diagnostic accuracy between mantle cell lymphoma and small lymphocytic lymphoma

    Zare, H., Bashashati, A., Kridel, R., Aghaeepour, N., Haffari, G., Connors, J. M., Gascoyne, R. D., Gupta, A., Brinkman, R. R. & Weng, A. P., Jan 2012, In: American journal of clinical pathology. 137, 1, p. 75-85 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    28 Scopus citations
  • B cells with high side scatter parameter by flow cytometry correlate with inferior survival in diffuse large B-cell lymphoma

    Bashashati, A., Johnson, N. A., Khodabakhshi, A. H., Whiteside, M. D., Zare, H., Scott, D. W., Lo, K., Gottardo, R., Brinkman, F. S. L., Connors, J. M., Slack, G. W., Gascoyne, R. D., Weng, A. P. & Brinkman, R. R., May 2012, In: American journal of clinical pathology. 137, 5, p. 805-814 10 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    8 Scopus citations
  • Early immunologic correlates of HIV protection can be identified from computational analysis of complex multivariate T-cell flow cytometry assays

    Aghaeepour, N., Chattopadhyay, P. K., Ganesan, A., O'neill, K., Zare, H., Jalali, A., Hoos, H. H., Roederer, M. & Brinkman, R. R., Apr 2012, In: Bioinformatics. 28, 7, p. 1009-1016 8 p., bts082.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    58 Scopus citations
  • 2010

    Data reduction for spectral clustering to analyze high throughput flow cytometry data

    Zare, H., Shooshtari, P., Gupta, A. & Brinkman, R. R., Jul 28 2010, In: BMC bioinformatics. 11, 403.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    111 Scopus citations